If I also want to align to my genome of interest when adaptive sampling is on, do I have to specify alignment as well? | Oxford Nanopore Technologies Help Center

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If I also want to align to my genome of interest when adaptive sampling is on, do I have to specify alignment as well?

If I also want to align to my genome of interest when adaptive sampling is on, do I have to specify alignment as well?

Updated over a week ago

Yes, you need to select a reference that you want to align your reads to to get a .bam file as an output.